| Raphael, Most Attitude (12 variants) | 101 |
| Raphael, Ninja Destroyer (12 variants) | 102 |
| Raphael, the Nightwatcher (12 variants) | 103 |
| Raphael, Tough Turtle (12 variants) | 104 |
| Raphael's Technique (12 variants) | 105 |
| Ravenous Robots (12 variants) | 106 |
| Rock Soldiers (12 variants) | 107 |
| Slash, Reptile Rampager (12 variants) | 108 |
| Spicy Oatmeal Pizza (12 variants) | 109 |
| Wingnut, Bat on the Belfry (12 variants) | 110 |
| Zog, Triceraton Castaway (12 variants) | 111 |
| Courier of Comestibles (12 variants) | 112 |
| Cowabunga! (12 variants) | 113 |
| Frog Butler (12 variants) | 114 |
| Groundchuck & Dirtbag (12 variants) | 115 |
| Guac & Marshmallow Pizza (12 variants) | 116 |
| Leatherhead, Swamp Stalker (12 variants) | 117 |
| Michelangelo, Game Master (12 variants) | 118 |
| Michelangelo, Improviser (12 variants) | 119 |
| Michelangelo, Mutant BFF (12 variants) | 120 |
| Michelangelo, Weirdness to 11 (12 variants) | 121 |
| Michelangelo's Technique (12 variants) | 122 |
| Mona Lisa, Science Geek (12 variants) | 123 |
| Mutagen Man, Living Ooze (12 variants) | 124 |
| Mutant Chain Reaction (12 variants) | 125 |
| New Generation's Technique (12 variants) | 126 |
| Novel Nunchaku (12 variants) | 127 |
| Party Dude (12 variants) | 128 |
| Primordial Pachyderm (12 variants) | 129 |
| Ragamuffin Raptor (12 variants) | 130 |
| Rocksteady, Crash Courser (12 variants) | 131 |
| Saved by the Shell (12 variants) | 132 |
| Tenderize (12 variants) | 133 |
| Transdimensional Bovine (12 variants) | 134 |
| Turtle Power! (12 variants) | 135 |
| Venus, Torn Between Worlds (12 variants) | 136 |
| West Wind Avatar (12 variants) | 137 |
| Zoo Escapees (12 variants) | 138 |
| Baxter Stockman (12 variants) | 139 |
| Bebop & Rocksteady (12 variants) | 140 |
| Brilliance Unleashed (12 variants) | 141 |
| Dark Leo & Shredder (12 variants) | 142 |
| Don & Leo, Problem Solvers (12 variants) | 143 |
| Don & Raph, Hard Science (12 variants) | 144 |
| EPF Point Squad (12 variants) | 145 |
| Foot Elite (12 variants) | 146 |
| Foot Ninjas (12 variants) | 147 |
| Genghis Frog (12 variants) | 148 |
| Go Ninja Go (12 variants) | 149 |
| Ice Cream Kitty (12 variants) | 150 |