| Michelangelo, Mutant BFF (12 variants) | 120 |
| Michelangelo, Improviser (12 variants) | 119 |
| Michelangelo, Game Master (12 variants) | 118 |
| Leatherhead, Swamp Stalker (12 variants) | 117 |
| Guac & Marshmallow Pizza (12 variants) | 116 |
| Groundchuck & Dirtbag (12 variants) | 115 |
| Frog Butler (12 variants) | 114 |
| Cowabunga! (12 variants) | 113 |
| Courier of Comestibles (12 variants) | 112 |
| Zog, Triceraton Castaway (12 variants) | 111 |
| Wingnut, Bat on the Belfry (12 variants) | 110 |
| Spicy Oatmeal Pizza (12 variants) | 109 |
| Slash, Reptile Rampager (12 variants) | 108 |
| Rock Soldiers (12 variants) | 107 |
| Ravenous Robots (12 variants) | 106 |
| Raphael's Technique (12 variants) | 105 |
| Raphael, Tough Turtle (12 variants) | 104 |
| Raphael, the Nightwatcher (12 variants) | 103 |
| Raphael, Ninja Destroyer (12 variants) | 102 |
| Raphael, Most Attitude (12 variants) | 101 |
| Purple Dragon Punks (12 variants) | 100 |
| Old Hob, Alleycat Blues (12 variants) | 99 |
| Null Group Biological Assets (12 variants) | 98 |
| Mutant Town Musicians (12 variants) | 97 |
| Mouser Foundry (12 variants) | 96 |
| Mouser Attack! (12 variants) | 95 |
| Manhole Missile (12 variants) | 94 |
| Jennika's Technique (12 variants) | 93 |
| Improvised Arsenal (12 variants) | 92 |
| Hard-Won Jitte (12 variants) | 91 |
| General Traag, Heart of Stone (12 variants) | 90 |
| Cool but Rude (12 variants) | 89 |
| Casey Jones, Vigilante (12 variants) | 88 |
| Casey Jones, Jury-Rig Justiciar (12 variants) | 87 |
| Broadcast Takeover (12 variants) | 86 |
| Bot Bashing Time (12 variants) | 85 |
| Tunnel Rats (12 variants) | 84 |
| Super Shredder (12 variants) | 83 |
| Stomped by the Foot (12 variants) | 82 |
| Squirrelanoids (12 variants) | 81 |
| Splinter's Technique (12 variants) | 80 |
| Splinter, Hamato Yoshi (12 variants) | 79 |
| South Wind Avatar (12 variants) | 78 |
| Shredder's Technique (12 variants) | 77 |
| Shredder's Revenge (12 variants) | 76 |
| Shredder's Armor (12 variants) | 75 |
| Shredder, Unrelenting (12 variants) | 74 |
| Shark Shredder, Killer Clone (12 variants) | 73 |
| Savanti Romero, Time's Exile (12 variants) | 72 |
| Rat King, Verminister (12 variants) | 71 |