| Foot Mystic (12 variants) | 63 |
| Foot Headquarters (12 variants) | 185 |
| Foot Elite (12 variants) | 146 |
| Featherbrained Filcher (12 variants) | 6 |
| Everything Pizza (12 variants) | 173 |
| Escape Tunnel (12 variants) | 184 |
| EPF Point Squad (12 variants) | 145 |
| East Wind Avatar (12 variants) | 5 |
| Dream Beavers (12 variants) | 62 |
| Donatello's Technique (12 variants) | 228 |
| Donatello's Technique (12 variants) | 39 |
| Donatello, Way with Machines (12 variants) | 38 |
| Donatello, Way with Machines (12 variants) | 197 |
| Donatello, Turtle Techie (12 variants) | 37 |
| Donatello, Mutant Mechanic (12 variants) | 216 |
| Donatello, Mutant Mechanic | 302 |
| Donatello, Mutant Mechanic (12 variants) | 36 |
| Donatello, Gadget Master | 283 |
| Donatello, Gadget Master (12 variants) | 35 |
| Donatello, Gadget Master | 293 |
| Donatello, Gadget Master (12 variants) | 212 |
| Don & Raph, Hard Science (12 variants) | 144 |
| Don & Raph, Hard Science (12 variants) | 205 |
| Don & Raph, Hard Science (12 variants) | 243 |
| Don & Leo, Problem Solvers (12 variants) | 143 |
| Don & Leo, Problem Solvers (12 variants) | 242 |
| Does Machines (12 variants) | 34 |
| Dimensional Exile (12 variants) | 4 |
| Dimension X (12 variants) | 183 |
| Death in the Family (12 variants) | 61 |
| Dark Leo & Shredder (12 variants) | 142 |
| Dark Leo & Shredder | 299 |
| Dark Leo & Shredder | 289 |
| Dark Leo & Shredder (12 variants) | 220 |
| Crustacean Commando (12 variants) | 33 |
| Cowabunga! (12 variants) | 113 |
| Courier of Comestibles (12 variants) | 112 |
| Cool but Rude (12 variants) | 89 |
| Chrome Dome (12 variants) | 172 |
| Chrome Dome (2 variants) | 276 |
| Casey Jones, Vigilante | 286 |
| Casey Jones, Vigilante (12 variants) | 235 |
| Casey Jones, Vigilante (12 variants) | 88 |
| Casey Jones, Vigilante | 296 |
| Casey Jones, Jury-Rig Justiciar (12 variants) | 207 |
| Casey Jones, Jury-Rig Justiciar (12 variants) | 87 |
| Buzz Bots (12 variants) | 32 |
| Broadcast Takeover (12 variants) | 234 |
| Broadcast Takeover (12 variants) | 86 |
| Brilliance Unleashed (12 variants) | 141 |